Extract numerical trajectories of parameters during ngme optimization
without creating plots. This function provides the underlying data
used by traceplot().
Usage
get_trace_trajectories(ngme, name = "general", apply_transform = TRUE)
Arguments
- ngme
ngme object
- name
name of latent models, otherwise get fixed effects and measurement noise
should be in names(ngme$models) or other
- apply_transform
logical, whether to apply parameter transformations (default: TRUE)
Value
list containing:
- trajectories
named list of trajectory matrices for each parameter
- parameter_names
character vector of parameter names
- transformations
list of transformation functions used
- n_chains
number of chains
- n_iterations
number of iterations
